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perseus:user:activities:matrixprocessing:modifications:shortenmotifs

Shorten motif length

General

Brief description

Sequence windows are shortened based on start and length parameters.

Parameters

Sequence window

Selected text column that contains the amino acid sequences (default: first text column in the matrix).

Start

Start position of the newly generated shorter sequences, which are displayed in a new generated text column called “Short sequence window” (default: 6). The flanks will be measured with respect to this position.

Hint: Start + Length cannot exceed the length of any protein sequence in the selected text column.

Length

Length of the newly generated sequences (default: 11). Flanking regions of this length will be kept surrounding the central position.

Parameter window

Perseus pop-up window: Modifications -> Shorten motif length

perseus/user/activities/matrixprocessing/modifications/shortenmotifs.txt · Last modified: 2015/12/09 16:41 by temu