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perseus:user:activities:matrixprocessing:modifications:addknownsites

Add known sites

General

Brief description

Sites that are known in PhosphoSitePlus are indicated.

Parameters

Modification

Selected modification for which the known sites should be added (default: Phosphorylation). The modification can be selected from a predefined list:

  • Acetylation
  • Methylation
  • O-GlcNAc
  • Phosphorylation
  • Sumoyalation
  • Ubiquitination

Uniprot column

Selected text column that contains the Uniprot identifiers (default: first text column in the matrix).

Sequence column

Selected text column that contains the sequence windows around the sites (default: first text column in the matrix).

Parameter window

Perseus pop-up window: Modifications -> Add known sites

perseus/user/activities/matrixprocessing/modifications/addknownsites.txt · Last modified: 2015/12/09 16:40 by temu